46 lines
1.6 KiB
Python
46 lines
1.6 KiB
Python
from rs.reaction_system_with_concentrations import ReactionSystemWithConcentrations
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from rs.reaction_system_with_concentrations_param import ReactionSystemWithConcentrationsParam
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from rs.context_automaton_with_concentrations import ContextAutomatonWithConcentrations
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class ReactionSystemWithAutomaton(object):
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def __init__(self, reaction_system, context_automaton):
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self.rs = reaction_system
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self.ca = context_automaton
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def show(self, soft=False):
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self.rs.show(soft)
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self.ca.show()
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def is_concentr_and_param_compatible(self):
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"""
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Checks if the underlying RS/CA are compatible
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with parameters and concentrations
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"""
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if not isinstance(self.rs, ReactionSystemWithConcentrationsParam):
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return False
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if not isinstance(self.ca, ContextAutomatonWithConcentrations):
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return False
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return True
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def is_with_concentrations(self):
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if not isinstance(self.rs, ReactionSystemWithConcentrations):
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return False
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if not isinstance(self.ca, ContextAutomatonWithConcentrations):
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return False
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return True
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def sanity_check(self):
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pass
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def get_ordinary_reaction_system_with_automaton(self):
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if not self.is_with_concentrations():
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raise RuntimeError("Not RS/CA with concentrations")
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ors = self.rs.get_reaction_system()
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oca = self.ca.get_automaton_with_flat_contexts(ors)
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return ReactionSystemWithAutomaton(ors, oca)
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