Commit Graph

325 Commits

Author SHA1 Message Date
Artur Meski
063e8063cc Moved "Next level?" to after we check max_level 2016-03-03 06:54:41 +01:00
Artur Meski
1746bf86c8 still trying with glucose assimilation... 2016-03-02 22:12:50 +01:00
Artur Meski
561413b79f expire_sugar entity 2016-03-02 18:18:36 +01:00
Artur Meski
e879740162 Removal of the log files. 2016-03-02 18:10:47 +01:00
Artur Meski
02606e32bf Permanency encoding. Allows preserving concentration levels for a specified entity. Permanency can also be inhibited. 2016-03-02 18:09:07 +01:00
Artur Meski
6ab5304628 Permanent entities implementation. Allows for preserving concentration levels when the inhibitors are not provided. 2016-03-02 18:08:07 +01:00
Artur Meski
3f3690c861 working on Blood-Glucose example 2016-03-01 21:25:34 +01:00
Artur Meski
0137a20867 simplify 2016-02-29 08:35:49 +01:00
Artur Meski
249e8ca594 Just to be sure... 2016-02-28 22:57:37 +01:00
Artur Meski
ef6f2edd33 Incrementation & decrementation by a specified value. 2016-02-28 20:12:43 +01:00
Artur Meski
8a739b0760 Resources reporting. Chain reaction benchmark, etc. 2016-02-24 22:49:40 +01:00
Artur Meski
9c7cbc74f7 Benchmarks. Resources reporting, etc. 2016-02-24 22:49:02 +01:00
Artur Meski
b21a0cee48 Translation RSC->RS for meta-reactions. 2016-02-21 14:55:48 +01:00
Artur Meski
060f5dc1f5 Meta-reactions 2016-02-20 23:35:08 +01:00
Artur Meski
1f5938ba96 Translation RSC -> RS. CA translation - to be done. 2016-02-19 18:19:50 +01:00
Artur Meski
9e025c2c9a Implementation of reachability testing for RSC using SMT. Intitially tested version. No known issues. 2016-02-17 21:41:43 +01:00
Artur Meski
8853589ff8 Transitioning boolean variables to integer variables in the SMT encoding. 2016-02-16 21:57:55 +01:00
Artur Meski
6018df00d8 SMT for RSC. Initial commit with the stub class. 2016-02-16 20:34:17 +01:00
Artur Meski
9245546d3d Reaction Systems with Concentrations. Context Automaton class. 2016-02-14 20:25:07 +01:00
Artur Meski
6aaca2ba27 ReactionSystemsWithConcentration. Backup 2016-02-14 16:08:37 +01:00
Artur Meski
7d6a48d2c2 bitctr 2016-02-13 23:41:53 +01:00
Artur Meski
6f86bc0e2a rs_examples.py 2016-02-13 19:32:40 +01:00
Artur Meski
7cf71c8a22 Messing things up 2016-02-13 19:32:08 +01:00
Artur Meski
167284eb85 initial commit with .py files 2015-12-07 23:09:37 +00:00
Artur Meski
edea811ad8 Initial commit with contributors 2015-12-07 23:07:32 +00:00